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THE GENE MAPPING ALGORITHMS FOR SPECIFICATION THE LOCATIONS OF GENETIC DISEASES

Huynh Thi My Trang 1
Tran Van Lang 1
Volume & Issue: Vol. 9 No. 6 (2006) | Page No.: 5-12 | DOI: 10.32508/stdj.v9i6.2914
Published: 2006-06-30

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Copyright The Author(s) 2023. This article is published with open access by Vietnam National University, Ho Chi Minh city, Vietnam. This article is distributed under the terms of the Creative Commons Attribution License (CC-BY 4.0) which permits any use, distribution, and reproduction in any medium, provided the original author(s) and the source are credited. 

Abstract

The "Gene mapping” refers to mapping of genes to specific locations on chromosomes. It is a critical step in the understanding of genetic diseases. There are two types of gene mapping: genetic mapping - using linkage analysis to determine the relation between two genes on a chromosome; physical mapping - using all available techniques or information to determine the absolute position of a gene on a chromosome. In this paper we propose an approach to improve the efficiency of the algorithms using linkage analysis on gene mapping. We build the algorithms by using the Haplotype Pattern Mining (HPM) Algorithms and Density Based Spatial Clustering of Application with Noise Algorithm (DBSCAN). These algorithms are implemented on the Grid Computing System which includes the clusters of HCMC Institute of Information Technology (IOIT-HCM) and Korea Institute of Science and Technology Information (KISTI).

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